Click name ↑ to return to homepage
For fastq or fastq.gz reads:
seqkit stats myreads.fastq.gz > seqtkit_stats.txt
-a means give additional stats
seqkit stats myreads1.fastq.gz myreads2.fastq.gz -Ta > seqtkit_stats.tsv
For assembly.fasta:
seqkit stats assembly.fasta > seqkit_assembly_stats.txt